mrcImageTTest

mrcImageTTest is Eos's Command that performs t-test between images.

List of option

Main option

Option	Essential/Optional	Description	Default
-i	Optional	Input: ASCII(File List)	NULL
-I	Optional	Input: (mrcImage(Average), mrcImage(Variance), N)	(NULL, NULL, 0)
-Nor	Optional	Input: NormalizingParameter: A + B*x: (A, B)	(0.0, 1.0)
-r	Optional	Reference: ASCII(File List)	NULL
-R	Optional	Reference: (mrcImage(Average), mrcImage(Variance), N)	(NULL, NULL, 0)
-NorR	Optional	Reference:NormalizingParameter: A + B*x: (A, B)	(0.0, 1.0)
-o	Optional	Output: Probability	NULL
-t	Optional	Output: t-value	NULL
-c	Optional	ConfigurationFile	NULL
-m	Optional	Mode	0
-h	Optional	Help

-i or -I is required for Input file, and -r or -R is required for Reference file.
Average, Variance file of -I, -R is created by mrcImageSN.

-m details

Value	Description
0

-i, -r format

File1
File2
.
.

Execution example

-i data

Input-1VOM-N-2D.mrc
Input-1VOM-N-Rot-2D.mrc
Input-1VOM-N-Rot1-2D.mrc

Input-1VOM-N-2D.mrc's image

Min Max Mean SD SE

-18651.7 (10, 1, 0) 52942.7 (24, 39, 0) 7214.87 10067.6 125.845

Input-1VOM-N-Rot-2D.mrc's image

Min Max Mean SD SE

-11367.8 (51, 62, 0) 51939.8 (29, 26, 0) 6580.18 9247.8 115.597

Input-1VOM-N-Rot1-2D.mrc's image

Min Max Mean SD SE

-14918 (53, 17, 0) 58621.8 (30, 26, 0) 6579.96 9022.72 112.784

-I data

Input: I=(Input-1VOM-N-2D-A.mrc, Input-1VOM-N-2D-Var.mrc, 3)

Input-1VOM-N-2D-A.mrc's image(-i file's average)

Min Max Mean SD SE

-7385.85 (61, 29, 0) 41209.8 (29, 26, 0) 6791.67 8335.26 104.191

Input-1VOM-N-2D-Var.mrc's image(-i file's variance)

Min Max Mean SD SE

62.2022 (11, 5, 0) 5.06054e+08 (45, 28, 0) 3.00629e+07 4.18721e+07 523402

-r data

Input-1VOM-2D.mrc
Input-1VOM-Rot-2D.mrc
Input-1VOM-Rot1-2D.mrc

Input-1VOM-2D.mrc's image

Min Max Mean SD SE

0 (0, 0, 0) 49749.7 (27, 28, 0) 7212.9 8827.15 110.339

Input-1VOM-Rot-2D.mrc's image

Min Max Mean SD SE

-609.552 (68, 18, 0) 43476 (45, 47, 0) 6507.15 7376.01 92.2001

Input-1VOM-Rot1-2D.mrc's image

Min Max Mean SD SE

-2.31309e-06 (29, 7, 0) 49749.2 (52, 51, 0) 6572.32 8769.91 109.624

-R data

Input: I=(Input-1VOM-2D-A.mrc, Input-1VOM-2D-Var.mrc, 3)

Input-1VOM-2D-A.mrc's image(-r file's average)

Min Max Mean SD SE

-145.807 (2, 45, 0) 31890.8 (45, 47, 0) 6764.13 6642.45 83.0307

Input-1VOM-2D-Var.mrc's image(-r file's variance)

Min Max Mean SD SE

0 (0, 0, 0) 7.26565e+08 (27, 28, 0) 3.85865e+07 5.61164e+07 701454

Example of options only essential

Case: -i, -r

-o 's image

Min Max Mean SD SE

-99.9368 (45, 3, 0) 99.9301 (76, 50, 0) -1.29958 58.3662 0.729578

-t 's image

Min Max Mean SD SE

-13.383 (30, 3, 0) 30.6481 (76, 50, 0) -0.00954761 1.39399 0.0174249

Case: -I, -R

It is the same output as the -i, -r.

-o 's image

Min Max Mean SD SE

-99.9368 (45, 3, 0) 99.9301 (76, 50, 0) -1.29958 58.3662 0.729578

-t 's image

Min Max Mean SD SE

-13.383 (30, 3, 0) 30.6481 (76, 50, 0) -0.00954761 1.39399 0.0174249

In the following, Setting at -I, -R

Option -Nor

Case: Nor=(0, 0.4)

-o 's image

Min Max Mean SD SE

-99.9762 (46, 37, 0) 99.9871 (76, 50, 0) -42.9433 49.5383 0.619228

-t 's image

Min Max Mean SD SE

-13.9446 (39, 40, 0) 27.7973 (76, 50, 0) -1.06447 1.61062 0.0201327

Option -NorR

Case: NorR=(0, 0.4)

-o 's image

Min Max Mean SD SE

-99.819 (45, 3, 0) 99.9888 (30, 32, 0) 32.2003 59.6772 0.745965

-t 's image

Min Max Mean SD SE

-13.383 (30, 3, 0) 31.1071 (76, 50, 0) 1.00935 1.92418 0.0240522