Difference between revisions of "Integration Commands"

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(List of Integration Command)
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Here, we show the list of Integration Command provided in [[Eos]]. Currently, most of them is written by Makefile or bash. We will provide those written by [[PIONE]] in the near future.
 
Here, we show the list of Integration Command provided in [[Eos]]. Currently, most of them is written by Makefile or bash. We will provide those written by [[PIONE]] in the near future.
  
===[[Image Correction]]: [[CTF Correction]]===
+
===[[Image Correction]]===
===[[Single particle analysis]]: [[Classification of 2D images|Classification of 2D images (Cluster analysis) and getting of average image]]===
+
====[[CTF Correction]]====
===[[Single particle analysis]]: [[3D Reconstruction1|Estimation of projection angle using reference]]===
+
===[[Single particle analysis]]===
===[[Single particle analysis]]: [[3D Reconstruction2|Helical Single particle analysis]]===
+
====[[Classification of 2D images|Classification of 2D images (Cluster analysis) and getting of average image]]====
===[[Electron tomography]][[3D Reconstruction3|Electron tomography method by using multiple ROI files]]===
+
====[[3D Reconstruction1|Estimation of projection angle using reference]]====
===[[Helical Symmetry analysis]][[3D Reconstruction4|3D Reconstruction by Helical Symmetry]]===
+
====[[3D Reconstruction2|Helical Single particle analysis]]====
 +
===[[Electron tomography]]===
 +
====[[3D Reconstruction3|Electron tomography method by using multiple ROI files]]====
 +
===[[Helical Symmetry analysis]]===
 +
====[[3D Reconstruction4|3D Reconstruction by Helical Symmetry]]====
 
===[[2D Image Processing]]===
 
===[[2D Image Processing]]===
 
===[[3D Image Processing]]===
 
===[[3D Image Processing]]===

Revision as of 01:51, 5 August 2014

List of Integration Command

Here, we show the list of Integration Command provided in Eos. Currently, most of them is written by Makefile or bash. We will provide those written by PIONE in the near future.

Image Correction

CTF Correction

Single particle analysis

Classification of 2D images (Cluster analysis) and getting of average image

Estimation of projection angle using reference

Helical Single particle analysis

Electron tomography

Electron tomography method by using multiple ROI files

Helical Symmetry analysis

3D Reconstruction by Helical Symmetry

2D Image Processing

3D Image Processing

Resolution analysis

FRET analysis

Modeling