Difference between revisions of "Integration Commands"

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Here, we show the list of Integration Command provided in [[Eos]]. Currently, most of them is written by Makefile or bash. We will provide those written by [[PIONE]] in the near future.
 
Here, we show the list of Integration Command provided in [[Eos]]. Currently, most of them is written by Makefile or bash. We will provide those written by [[PIONE]] in the near future.
  
#[[Image Correction]]: [[CTF Correction]]
+
===[[Image Correction]]: [[CTF Correction]]===
#[[Single particle analysis]]: [[Classification of 2D images|Classification of 2D images (Cluster analysis) and getting of average image]]
+
===[[Single particle analysis]]: [[Classification of 2D images|Classification of 2D images (Cluster analysis) and getting of average image]]===
#[[Single particle analysis]]: [[3D Reconstruction1|Estimation of projection angle using reference]]
+
===[[Single particle analysis]]: [[3D Reconstruction1|Estimation of projection angle using reference]]===
#[[Single particle analysis]]: [[3D Reconstruction2|Helical Single particle analysis]]
+
===[[Single particle analysis]]: [[3D Reconstruction2|Helical Single particle analysis]]===
#[[Electron tomography]]: [[3D Reconstruction3|Electron tomography method by using multiple ROI files]]
+
===[[Electron tomography]]: [[3D Reconstruction3|Electron tomography method by using multiple ROI files]]===
#[[Helical Symmetry analysis]]: [[3D Reconstruction4|3D Reconstruction by Helical Symmetry]]
+
===[[Helical Symmetry analysis]]: [[3D Reconstruction4|3D Reconstruction by Helical Symmetry]]===
#[[2D Image Processing]]
+
===[[2D Image Processing]]===
#[[3D Image Processing]]
+
===[[3D Image Processing]]===
#[[Resolution analysis]]
+
===[[Resolution analysis]]===
#[[FRET analysis]]
+
===[[FRET analysis]]===
#[[Modeling]]
+
===[[Modeling]]===

Revision as of 01:47, 5 August 2014

List of Integration Command

Here, we show the list of Integration Command provided in Eos. Currently, most of them is written by Makefile or bash. We will provide those written by PIONE in the near future.

Image Correction: CTF Correction

Single particle analysis: Classification of 2D images (Cluster analysis) and getting of average image

Single particle analysis: Estimation of projection angle using reference

Single particle analysis: Helical Single particle analysis

Electron tomographyElectron tomography method by using multiple ROI files

Helical Symmetry analysis3D Reconstruction by Helical Symmetry

2D Image Processing

3D Image Processing

Resolution analysis

FRET analysis

Modeling