「機能別ライブラリ(API)一覧」の版間の差分

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'''機能別ライブラリ(API)一覧'''では、機能毎にＡＰＩを分類して示します。
 
'''機能別ライブラリ(API)一覧'''では、機能毎にＡＰＩを分類して示します。
  
−
= GeneralクラスのAPI=
+
= GeneralクラスのAPI =
 +
== 一般的なツール ==
 +
*[[genUtil(API)]]
 +
 
 +
== Eosのため==
 +
*[[Eos(API)]]
 +
 
 +
== 特殊な値 ==
 +
*[[SpecialNumber(API)]]
 +
 
 +
== ファイル ==
 +
*[[File(API)]]
 +
 
 +
== ソケット ==
 +
*[[Socket(API)]]
 +
 
 +
== PVM ==
 +
*[[PVM(API)]]
 +
 
 +
== 記憶 ==
 +
*[[Memory(API)]]
 +
 
 +
== 文字列==
 +
*[[String(API)]]
 +
 
 +
== ベクトル ==
 +
*[[Vector(API)]]
 +
 
 +
== 配列([[Array]]) ==
 +
配列を取り扱うためのオブジェクトです。
 +
 
 +
*[[Array(API)]]
 +
 
 +
 
 +
== ３次元変換 ==
 +
３次元画像変換の為の4x4次元の配列です。
 +
*[[Matrix3D(API)]]
 +
 
 +
== 乱数 ==
 +
*[[Random(API)]]
 +
 
 +
== クラスター ==
 +
*[[Cluster(API)]]
 +
 
 +
 
 +
== 結晶 ==
 +
*[[Crystal(API)]]
 +
 
 +
== ２次元地図 ==
 +
*[[Map2D(API)]]
 +
 
 +
== AI（人工知能） ==
 +
*[[NeuralNet(API)]]
 +
*[[lmrcNeuralNet(API)]]
 +
 
 +
== 並列化 ==
 +
=== [[eosPThread(API)]]===
 +
 
 +
=== [[eosCuda(API)]]===
  
 
= DataManipクラスのAPI =
 
= DataManipクラスのAPI =
行9: 行67:
  
 
=== 入出力等の低水準ライブラリ ===
 
=== 入出力等の低水準ライブラリ ===
−
*mrcImage型の画像を取り扱うための低水準ＡＰＩ：[[mrcImage.h]]
+
*[[mrcImage(API)]]: mrcImage型の画像を取り扱うための低水準API
  
−
==== 初期化 ====
+
*[[mrcFFTCTFCompensation(API)]]
−
*extern mrcStatusType mrcInit(mrcImage* mrc, char* filaname);
+
*[[mrcFFTInfo(API)]]
−
*extern mrcStatusType mrcDefaultHeaderValueSet(mrcImage* mrc);
+
−
**extern mrcStatusType mrcHiddenDataSet(mrcImage* mrc, long mode);
+
−
*extern void mrcImageFree(mrcImage* mrc, char* message);
+
−
*extern void mrcTailerInit(mrcImage* mrc, long mode);
+
−
*extern void mrcTailerCopy(mrcImage* dst, mrcImage* src, long mode);
+
  
−
==== ファイルの読み込み ====
+
*[[mrcImageAssignedToTFofPDB(API)]]
−
*extern mrcStatusType mrcFileRead  (mrcImage* mrc, char* filename, char* message, long mode);
+
*[[mrcImageAutoRotationCorrelation(API)]]
−
**extern mrcStatusType mrcImageRead (mrcImage* mrc, char* filename, char* message, long mode);
+
*[[mrcImageAutoRotationCorrelationResultPrint(API)]]
−
**extern mrcStatusType mrcHeaderRead(mrcImage* mrc, char* filename, char* message, long mode);
+
*[[mrcImageCTFCompensation(API)]]
−
**extern mrcStatusType mrcTailerRead(mrcImage* mrc, char* filename, char* message, long mode);
+
*[[mrcImageCTFObservation(API)]]
 +
*[[mrcImageColoring(API)]]
 +
*[[mrcImageCorrelation(API)]]
 +
*[[mrcImageCorrelationWithCTFCompensation(API)]]
 +
*[[mrcImageCrystalCreate(API)]]
 +
*[[mrcImageEnhancementWithFuzzySets(API)]]
 +
*[[mrcImageFFT(API)]]
 +
*[[mrcImageMasking(API)]]
 +
*[[mrcImageModelCreate(API)]]
 +
*[[mrcImageMultiCTFCompensation(API)]]
 +
*[[mrcImageNoiseAdd(API)]]
 +
*[[mrcImageNormalizing(API)]]
 +
*[[mrcImagePVM(API)]]
 +
*[[mrcImagePad(API)]]
 +
*[[mrcImagePrint(API)]]
 +
*[[mrcImagePrint3D(API)]]
 +
*[[mrcImageProjection(API)]]
 +
*[[mrcImagePut3D(API)]]
 +
*[[mrcImageROI(API)]]
 +
*[[mrcImageRotation(API)]]
 +
*[[mrcImageSN(API)]]
 +
*[[mrcImageShift(API)]]
 +
*[[mrcImageShrink(API)]]
 +
*[[mrcImageSmoothing(API)]]
 +
*[[mrcImageTwoImageTest(API)]]
 +
*[[mrcImageUnbentROI(API)]]
 +
*[[mrcImageUnexpectedMassFromPDB(API)]]
 +
*[[mrcImageWindowing(API)]]
 +
*[[mrcImagefuncmin(API)]]
 +
*[[mrcRefUtil(API)]]
 +
*[[lmrcFETnormalizeBySD(API)]]
 +
*[[lmrcFFTExpression(API)]]
 +
*[[lmrcFFTInfo(API)]]
 +
*[[lmrcFSInfoScatteringAngularDistributionAverageSection(API)]]
 +
*[[lmrcImage3DWindowing(API)]]
 +
*[[lmrcImageAddValue(API)]]
 +
*[[lmrcImageAsProbability(API)]]
 +
*[[lmrcImageAverage(API)]]
 +
*[[lmrcImageBinarization(API)]]
 +
*[[lmrcImageBoundaryInfo(API)]]
 +
*[[lmrcImageCTFCompensation(API)]]
 +
*[[lmrcImageCTFDetemination(API)]]
 +
*[[lmrcImageCTFDetermination(API)]]
 +
*[[lmrcImageCalcArea(API)]]
 +
*[[lmrcImageCentre(API)]]
 +
*[[lmrcImageClusterAnalysis(API)]]
 +
*[[lmrcImageCommonLine(API)]]
 +
*[[lmrcImageConectivityNumberCalc(API)]]
 +
*[[lmrcImageConnection(API)]]
 +
*[[lmrcImageConnectivityNumberCalc(API)]]
 +
*[[lmrcImageContourSurface(API)]]
 +
*[[lmrcImageContraction(API)]]
 +
*[[lmrcImageCorrelation(API)]]
 +
*[[lmrcImageCrystalCreate(API)]]
 +
*[[lmrcImageDataMaxAndMinGetByImage(API)]]
 +
*[[lmrcImageDataStraightCopy(API)]]
 +
*[[lmrcImageDeconvolution(API)]]
 +
*[[lmrcImageDensity(API)]]
 +
*[[lmrcImageDensityInverse(API)]]
 +
*[[lmrcImageDensityNormalizationByImage(API)]]
 +
*[[lmrcImageDistanceConversion(API)]]
 +
*[[lmrcImageEdge(API)]]
 +
*[[lmrcImageEdgeAverage(API)]]
 +
*[[lmrcImageFOMCalc(API)]]
 +
*[[lmrcImageFeatureExtraction(API)]]
 +
*[[lmrcImageFileListAndEulerAngleDataRead(API)]]
 +
*[[lmrcImageFilterCreate(API)]]
 +
*[[lmrcImageFirstNoiseReductionByRelaxation(API)]]
 +
*[[lmrcImageFourierShellCorrelation(API)]]
 +
*[[lmrcImageLabeling(API)]]
 +
*[[lmrcImageMasking(API)]]
 +
*[[lmrcImageMirroring(API)]]
 +
*[[lmrcImageModeChange(API)]]
 +
*[[lmrcImageModelCreate(API)]]
 +
*[[lmrcImageMontage(API)]]
 +
*[[lmrcImageMove(API)]]
 +
*[[lmrcImageMultiplying(API)]]
 +
*[[lmrcImageNormalizing(API)]]
 +
*[[lmrcImageOneLineSimilarityCalc(API)]]
 +
*[[lmrcImageOrientationSearchBySimultaneousMinimization(API)]]
 +
*[[lmrcImagePad(API)]]
 +
*[[lmrcImagePartImageSegmentation(API)]]
 +
*[[lmrcImagePixelSummationOfProbabilityGetByImage(API)]]
 +
*[[lmrcImagePosterization(API)]]
 +
*[[lmrcImagePrint(API)]]
 +
*[[lmrcImageProjection(API)]]
 +
*[[lmrcImageProportionalDensityLevelSetByImage(API)]]
 +
*[[lmrcImageROI2D(API)]]
 +
*[[lmrcImageROI3D(API)]]
 +
*[[lmrcImageRadialDistribution(API)]]
 +
*[[lmrcImageRhoFiltering(API)]]
 +
*[[lmrcImageSSDA(API)]]
 +
*[[lmrcImageSamplingUnitChange(API)]]
 +
*[[lmrcImageSecondNoiseReductionByRelaxation(API)]]
 +
*[[lmrcImageSecondNoiseReductionByRelaxationDijDimensionSet(API)]]
 +
*[[lmrcImageSecondNoiseReductionByRelaxationDijValueCalculate(API)]]
 +
*[[lmrcImageSecondNoiseReductionByRelaxationDijValueSet(API)]]
 +
*[[lmrcImageSecondNoiseReductionByRelaxationQValueSet(API)]]
 +
*[[lmrcImageSecondNoiseReductionByRelaxationRValueSet(API)]]
 +
*[[lmrcImageSigmaCalculate(API)]]
 +
*[[lmrcImageSinogram(API)]]
 +
*[[lmrcImageSinogramFFT(API)]]
 +
*[[lmrcImageSolventFlattening(API)]]
 +
*[[lmrcImageSphere(API)]]
 +
*[[lmrcImageSplit(API)]]
 +
*[[lmrcImageStudentCalculate(API)]]
 +
*[[lmrcImageSubtractionCalc(API)]]
 +
*[[lmrcImageSummationCalculate(API)]]
 +
*[[lmrcImageSymmetryFind(API)]]
 +
*[[lmrcImageTransformDescartesIntoPolar(API)]]
 +
*[[lmrcImageTriming(API)]]
 +
*[[lmrcImageVolumeCalc(API)]]
 +
*[[lmrcImageWindowing(API)]]
 +
*[[lmrcImagesStatDataGet(API)]]
 +
*[[lmrcNeuralNet(API)]]
 +
*[[lmrcSinogramFET(API)]]
 +
*[[lmrcSinogramFETcalcWeight(API)]]
 +
*[[lmrcSinogramFETcorrelationMap(API)]]
 +
*[[lmrcSinogramFETnormalizedMap(API)]]
 +
*[[lmrcSinogramFETreferredCorrelation(API)]]
 +
*[[lmrcSinogramFETsmoothParameterMatching(API)]]
 +
*[[lmrc2Dto3D(API)]]
 +
*[[lmrc3Dto2D(API)]]
 +
*[[lAllCommonLineCalculation(API)]]
 +
*[[lCommonLineCalculation(API)]]
 +
*[[lDescartesIntoPolar(API)]]
 +
*[[lEvaluateCorrelationMapwithCommonLine(API)]]
 +
*[[lFETOrientationSearchByAnnealing(API)]]
 +
*[[lFETOrientationSearchByFeatureAlignment(API)]]
 +
*[[lFETmapOrientationSearchBySimultaneousFitting(API)]]
 +
*[[lFETsmallMapSetCreate_forSimultaneousMinimization(API)]]
  
−
==== ファイルの書き出し ====
+
== ctfInfoに関連したAPI群 ==
−
*extern mrcStatusType mrcFileWrite  (mrcImage* mrc, char* filename, char* message, long mode);
+
*[[ctfInfo(API)]]
−
**extern mrcStatusType mrcImageWrite (mrcImage* mrc, char* filename, char* message, long mode);
+
*[[ctfDeterminationFromPhaseComparison(API)]]
−
**extern mrcStatusType mrcHeaderWrite(mrcImage* mrc, char* filename, char* message, long mode);
+
*[[ctfInfoWrite2(API)]]
−
**extern mrcStatusType mrcTailerWrite(mrcImage* mrc, char* filename, char* message, long mode);
+
*[[ctfZeroPoint(API)]]
 +
*[[lctfDetermination(API)]]
 +
*[[lastigmatismDetection(API)]]
 +
*[[powerspectraTangentLine(API)]]
  
 +
== 画像フォーマット変換用 ==
 +
*[[mrc2hdf(API)]]
 +
*[[mrc2map(API)]]
 +
*[[dsn6File(API)]]
  
−
*#define mrcFileWriteModeGet(x)     BYTE4GETBYTE(x,0)
+
*[[tgaFile(API)]]
−
*#define mrcImageWriteModeGet(x)   BYTE4GETBYTE(x,1)
+
*[[tiff(API)]]
−
*#define mrcHeaderWriteModeGet(x)  BYTE4GETBYTE(x,2)
+
*[[tiffio(API)]]
−
*#define mrcTailerWriteModeGet(x)   BYTE4GETBYTE(x,3)
+
*[[mapFile(API)]]
−
*#define mrcFileWriteMode_InfoPrint        1
+
*[[DCDFile(API)]]
−
*#define mrcFileWriteMode_NoCallForStatData 2
+
*[[largeIP(API)]]
  
−
*extern mrcStatusType mrcFileWriteLowerResolution(mrcImage* mrc, char* filename, char* message, long sample , long mode);
+
*[[IMAGIC(API)]]
 +
*[[emData(API)]]
  
−
==== 画素のデータの取得 ====
+
*[[RefUtil(API)]]
−
*ピクセル単位での画素データの取得
+
−
　extern double mrcPixelDataGet(mrcImage* mrc,
+
−
　                              mrcImageParaTypeReal x /* Pixel Unit */,
+
−
　                              mrcImageParaTypeReal y /* Pixel Unit */,
+
−
　                              mrcImageParaTypeReal z /* Pixel Unit */,
+
−
　                              double* data,
+
−
　                              mrcPixelDataType mode,
+
−
　                              mrcPixelDataHowToGet how);
+
  
−
*オングストローム単位での画素データの取得
 
−
　extern double mrcImageDataGetbyAU(mrcImage* mrc,
 
−
　                              mrcImageParaTypeReal x /* Angstrom */,
 
−
　                              mrcImageParaTypeReal y /* Angstrom */,
 
−
　                              mrcImageParaTypeReal z /* Angstrom */,
 
−
　                              double* data,
 
−
　                            mrcPixelDataType mode,
 
−
　                              mrcPixelDataHowToGet how);
 
  
−
*インライン型関数の画素データの取得
+
== らせん対称性をもちいた三次元再構成のためのAPI群 ==
−
**extern inline double mrcPixelDataGetFloatImage(mrcImage* img,
+
*[[llData(API)]]
−
　                mrcImageParaTypeInteger x, mrcImageParaTypeInteger y, mrcImageParaTypeInteger z)
+
*[[llDataPVM(API)]]
 +
*[[lll2ltlg(API)]]
 +
*[[lllDataAxisSearch(API)]]
 +
*[[lllDataCTF(API)]]
 +
*[[lllDataCTFCompensate(API)]]
 +
*[[lllDataCTFCompensation(API)]]
 +
*[[lllDataCompare(API)]]
 +
*[[lllDataContributionCalcDifferentN(API)]]
 +
*[[lllDataDifferenceCalc(API)]]
 +
*[[lllDataEquatorAdd(API)]]
 +
*[[lllDataExtract(API)]]
 +
*[[lllDataFit(API)]]
 +
*[[lllDataFitAndAverage(API)]]
 +
*[[lllDataFitParamInverse(API)]]
 +
*[[lllDataLowPassFiltering(API)]]
 +
*[[lllDataMergeDifferentN(API)]]
 +
*[[lllDataRescaling(API)]]
 +
*[[lllDatarMaxLimit(API)]]
 +
*[[lllExtract(API)]]
 +
*[[lllExtractCtfinfFileCreate(API)]]
 +
*[[lllExtractdYEstimate(API)]]
 +
*[[lltlg2mrc(API)]]
 +
*[[ltlgData(API)]]
  
−
**extern inline double mrcPixelDataGetFloatFTRe(mrcImage* fft,
+
== PDBに関連したライブラリ ==
−
　                mrcImageParaTypeInteger x, mrcImageParaTypeInteger y, mrcImageParaTypeInteger z)
+
*[[pdbFile(API)]]
 +
*[[pdbInfoGet(API)]]
 +
*[[lpdb2mrcInfo(API)]]
 +
*[[lpdbCoord(API)]]
 +
*[[lpdbCoordInfo(API)]]
 +
*[[lpdbSelectedAtom(API)]]
 +
*[[lpdbSurface(API)]]
  
−
**extern inline double mrcPixelDataGetFloatFTIm(mrcImage* fft,
 
−
　                mrcImageParaTypeInteger x, mrcImageParaTypeInteger y, mrcImageParaTypeInteger z)
 
  
−
==== 画素のデータの設定 ====
+
= DataExpressクラスのAPI =
−
*ピクセル単位の画素データの設定
+
== Tcl/Tk/VTKに関するAPI ==
−
　extern void mrcInfoSet(mrcImage* mrc, FILE* fptIn, FILE* fptOut, mrcImageParaTypeInteger mode);
+
*[[tkImgFmtMRC(API)]]
 +
*[[tkctfInfo(API)]]
 +
*[[vtkAdditionalCommandForEos(API)]]
 +
*[[vtkemDataImageReader(API)]]
 +
*[[vtkmrcImageReader(API)]]
 +
*[[vtkmrcImageWriter(API)]]
 +
*[[ActorMaker(API)]]
 +
*[[eosAxisSource(API)]]
 +
*[[eosAxisSource0905(API)]]
 +
*[[eosDataPicker(API)]]
 +
*[[eosInteractorMyStyle(API)]]
 +
*[[eosInteractorStyleStereo(API)]]
 +
*[[eosStereoModeOn(API)]]
 +
*[[eosStereoRenderer(API)]]
 +
*[[eosStereoWindow(API)]]
 +
*[[eosTclNewCommandCreate(API)]]
  
−
=== 画像フォーマット変換用===
+
*[[DataBase(API)]]
−
*mrc2hdf.h
+
*[[DataBaseCorba(API)]]
−
*mrc2map.h
+
*[[DataBaseCorbaBank(API)]]
 +
*[[DataBaseCorbaImpl(API)]]
 +
*[[DataBaseCorbaManager(API)]]
 +
*[[DataBaseJournal(API)]]
 +
*[[DataBaseMaker(API)]]
 +
*[[DataBaseNote(API)]]
 +
*[[DataSearcher(API)]]
 +
*[[DataStore(API)]]
 +
*[[FigureFactory(API)]]
 +
*[[FunctionMode(API)]]
 +
*[[HomologyStore(API)]]
 +
*[[PickedDataStore(API)]]
 +
*[[Property(API)]]
 +
*[[PropertyTcl(API)]]
 +
*[[ShapeMaker(API)]]
 +
== ポストスクリプトファイルに対するAPI ==
 +
*[[psFile(API)]]
  
  
  
−
=== 画像処理一般のライブラリ ===
+
== 等高線 ==
−
*mrcFFTCTFCompensation.h
+
*[[Contour(API)]]
−
*mrcFFTInfo.h
+
  
−
*mrcImageAssignedToTFofPDB.h
+
== ALSA（音源） ==
−
*mrcImageAutoRotationCorrelation.h
+
*[[alsa(API)]]
−
*mrcImageAutoRotationCorrelationResultPrint.h
+
−
*mrcImageCTFCompensation.h
+
−
*mrcImageCTFObservation.h
+
−
*mrcImageColoring.h
+
−
*mrcImageCorrelation.h
+
−
*mrcImageCorrelationWithCTFCompensation.h
+
−
*mrcImageCrystalCreate.h
+
−
*mrcImageEnhancementWithFuzzySets.h
+
−
*mrcImageFFT.h
+
−
*mrcImageMasking.h
+
−
*mrcImageModelCreate.h
+
−
*mrcImageMultiCTFCompensation.h
+
−
*mrcImageNoiseAdd.h
+
−
*mrcImageNormalizing.h
+
−
*mrcImagePVM.h
+
−
*mrcImagePad.h
+
−
*mrcImagePrint.h
+
−
*mrcImagePrint3D.h
+
−
*mrcImageProjection.h
+
−
*mrcImagePut3D.h
+
−
*mrcImageROI.h
+
−
*mrcImageRotation.h
+
−
*mrcImageSN.h
+
−
*mrcImageShift.h
+
−
*mrcImageShrink.h
+
−
*mrcImageSmoothing.h
+
−
*mrcImageTwoImageTest.h
+
−
*mrcImageUnbentROI.h
+
−
*mrcImageUnexpectedMassFromPDB.h
+
−
*mrcImageWindowing.h
+
−
*mrcImagefuncmin.h
+
−
*mrcRefUtil.h
+
−
*lmrcFETnormalizeBySD.h
+
−
*lmrcFFTExpression.h
+
−
*lmrcFFTInfo.h
+
−
*lmrcFSInfoScatteringAngularDistributionAverageSection.h
+
−
*lmrcImage3DWindowing.h
+
−
*lmrcImageAddValue.h
+
−
*lmrcImageAsProbability.h
+
−
*lmrcImageAverage.h
+
−
*lmrcImageBinarization.h
+
−
*lmrcImageBoundaryInfo.h
+
−
*lmrcImageCTFCompensation.h
+
−
*lmrcImageCTFDetemination.h
+
−
*lmrcImageCTFDetermination.h
+
−
*lmrcImageCalcArea.h
+
−
*lmrcImageCentre.h
+
−
*lmrcImageClusterAnalysis.h
+
−
*lmrcImageCommonLine.h
+
−
*lmrcImageConectivityNumberCalc.h
+
−
*lmrcImageConnection.h
+
−
*lmrcImageConnectivityNumberCalc.h
+
−
*lmrcImageContourSurface.h
+
−
*lmrcImageContraction.h
+
−
*lmrcImageCorrelation.h
+
−
*lmrcImageCrystalCreate.h
+
−
*lmrcImageDataMaxAndMinGetByImage.h
+
−
*lmrcImageDataStraightCopy.h
+
−
*lmrcImageDensity.h
+
−
*lmrcImageDensityInverse.h
+
−
*lmrcImageDensityNormalizationByImage.h
+
−
*lmrcImageDistanceConversion.h
+
−
*lmrcImageEdge.h
+
−
*lmrcImageEdgeAverage.h
+
−
*lmrcImageFOMCalc.h
+
−
*lmrcImageFeatureExtraction.h
+
−
*lmrcImageFileListAndEulerAngleDataRead.h
+
−
*lmrcImageFilterCreate.h
+
−
*lmrcImageFirstNoiseReductionByRelaxation.h
+
−
*lmrcImageFourierShellCorrelation.h
+
−
*lmrcImageLabeling.h
+
−
*lmrcImageMasking.h
+
−
*lmrcImageMirroring.h
+
−
*lmrcImageModeChange.h
+
−
*lmrcImageModelCreate.h
+
−
*lmrcImageMontage.h
+
−
*lmrcImageMove.h
+
−
*lmrcImageMultiplying.h
+
−
*lmrcImageNormalizing.h
+
−
*lmrcImageOneLineSimilarityCalc.h
+
−
*lmrcImageOrientationSearchBySimultaneousMinimization.h
+
−
*lmrcImagePad.h
+
−
*lmrcImagePartImageSegmentation.h
+
−
*lmrcImagePixelSummationOfProbabilityGetByImage.h
+
−
*lmrcImagePosterization.h
+
−
*lmrcImagePrint.h
+
−
*lmrcImageProjection.h
+
−
*lmrcImageProportionalDensityLevelSetByImage.h
+
−
*lmrcImageROI2D.h
+
−
*lmrcImageROI3D.h
+
−
*lmrcImageRadialDistribution.h
+
−
*lmrcImageRhoFiltering.h
+
−
*lmrcImageSSDA.h
+
−
*lmrcImageSamplingUnitChange.h
+
−
*lmrcImageSecondNoiseReductionByRelaxation.h
+
−
*lmrcImageSecondNoiseReductionByRelaxationDijDimensionSet.h
+
−
*lmrcImageSecondNoiseReductionByRelaxationDijValueCalculate.h
+
−
*lmrcImageSecondNoiseReductionByRelaxationDijValueSet.h
+
−
*lmrcImageSecondNoiseReductionByRelaxationQValueSet.h
+
−
*lmrcImageSecondNoiseReductionByRelaxationRValueSet.h
+
−
*lmrcImageSigmaCalculate.h
+
−
*lmrcImageSinogram.h
+
−
*lmrcImageSinogramFFT.h
+
−
*lmrcImageSolventFlattening.h
+
−
*lmrcImageSphere.h
+
−
*lmrcImageSplit.h
+
−
*lmrcImageStudentCalculate.h
+
−
*lmrcImageSubtractionCalc.h
+
−
*lmrcImageSummationCalculate.h
+
−
*lmrcImageSymmetryFind.h
+
−
*lmrcImageTransformDescartesIntoPolar.h
+
−
*lmrcImageTriming.h
+
−
*lmrcImageVolumeCalc.h
+
−
*lmrcImageWindowing.h
+
−
*lmrcImagesStatDataGet.h
+
−
*lmrcNeuralNet.h
+
−
*lmrcSinogramFET.h
+
−
*lmrcSinogramFETcalcWeight.h
+
−
*lmrcSinogramFETcorrelationMap.h
+
−
*lmrcSinogramFETnormalizedMap.h
+
−
*lmrcSinogramFETreferredCorrelation.h
+
−
*lmrcSinogramFETsmoothParameterMatching.h
+
  
−
== PDBに関連したライブラリ ==
+
== OpenGL==
−
*pdbFile.h
+
*[[openGL(API)]]
−
*pdbInfoGet.h
+
=== Molvieに関するAPI ===
 +
*[[molvieDefault(API)]]
 +
*[[molvieDockDefault(API)]]
 +
*[[molvieFlightDefault(API)]]
 +
*[[molvieMrcViewerDefault(API)]]
 +
*[[molvieProjectionDefault(API)]]
 +
*[[molvieViewerDefault.(API)]]
 +
*[[lmolvie(API)]]
 +
*[[lmolvieProteinStatus(API)]]
 +
*[[lmolvieViewer(API)]]
  
−
= DataExpressクラスのAPI =
+
== AVSファイル ==
−
== Tcl/Tk/VTKに関するAPI ==
+
*[[avsFile(API)]]
−
*vtkAdditionalCommandForEos.hh
+
 
−
*vtkemDataImageReader.hh
+
== gifファイル ==
−
*vtkmrcImageReader.hh
+
*[[gifFile(API)]]
−
*vtkmrcImageWriter.hh
+
*[[gif_lib(API)]]
 +
 
 +
= MachineManipクラスのAPI =
 +
== 電子顕微鏡HF2000の制御のためのAPI ==
 +
*[[hf2000(API)]]
 +
*[[lhf2000LenzCurrent(API)]]
 +
*[[lhf2000SpecimenPosition(API)]]
  
 
= 未分類 =
 
= 未分類 =
−
*ActorMaker.hh
 
−
*Array.h
 
−
*Cluster.h
 
−
*Contour.h
 
−
*Crystal.h
 
−
*DCDFile.h
 
−
*DataBase.hh
 
−
*DataBaseCorba.h
 
−
*DataBaseCorbaBank.hh
 
−
*DataBaseCorbaImpl.hh
 
−
*DataBaseCorbaManager.hh
 
−
*DataBaseJournal.hh
 
−
*DataBaseMaker.hh
 
−
*DataBaseNote.hh
 
−
*DataSearcher.hh
 
−
*DataStore.hh
 
−
*DisplayListNumber.h
 
−
*Eos.h
 
−
*FigureFactory.hh
 
−
*File.h
 
−
*FunctionMode.hh
 
−
*HomologyStore.hh
 
−
*IMAGIC.h
 
−
*Map2D.h
 
−
*Matrix3D.h
 
−
*Memory.h
 
−
*NeuralNet.h
 
−
*PVM.h
 
−
*PickedDataStore.hh
 
−
*Property.hh
 
−
*PropertyTcl.hh
 
−
*Random.h
 
−
*RefUtil.h
 
−
*ShapeMaker.hh
 
−
*Socket.h
 
−
*SpecialNumber.h
 
−
*String.h
 
−
*Test.h
 
−
*Vector.h
 
−
*aa.h
 
−
*alsa.h
 
−
*avsFile.h
 
−
*bar.h
 
−
*ctfDeterminationFromPhaseComparison.h
 
−
*ctfInfo.h
 
−
*ctfInfoWrite2.h
 
−
*ctfZeroPoint.h
 
−
*dsn6File.h
 
−
*emData.h
 
−
*eosAxisSource.hh
 
−
*eosAxisSource0905.hh
 
−
*eosDataPicker.hh
 
−
*eosInteractorMyStyle.hh
 
−
*eosInteractorStyleStereo.hh
 
−
*eosStereoModeOn.hh
 
−
*eosStereoRenderer.hh
 
−
*eosStereoWindow.hh
 
−
*eosTclNewCommandCreate.hh
 
−
*fft2d.h
 
−
*fftn.h
 
−
*genUtil.h
 
−
*gifFile.h
 
−
*gif_lib.h
 
−
*hf2000.h
 
−
*keos_proc.h
 
−
*khorosData.h
 
−
*lAllCommonLineCalculation.h
 
−
*lCommonLineCalculation.h
 
−
*lDescartesIntoPolar.h
 
−
*lEvaluateCorrelationMapwithCommonLine.h
 
−
*lFETOrientationSearchByAnnealing.h
 
−
*lFETOrientationSearchByFeatureAlignment.h
 
−
*lFETmapOrientationSearchBySimultaneousFitting.h
 
−
*lFETsmallMapSetCreate_forSimultaneousMinimization.h
 
−
*lFRET.h
 
−
*lLcalculation.h
 
−
*largeIP.h
 
−
*lastigmatismDetection.h
 
−
*lctfDetermination.h
 
−
*lhf2000LenzCurrent.h
 
−
*lhf2000SepecimenPosition.h
 
−
*lhf2000SpecimenPosition.h
 
−
*llData.h
 
−
*llDataPVM.h
 
−
*lll2ltlg.h
 
−
*lllDataAxisSearch.h
 
−
*lllDataCTF.h
 
−
*lllDataCTFCompensate.h
 
−
*lllDataCTFCompensation.h
 
−
*lllDataCompare.h
 
−
*lllDataContributionCalcDifferentN.h
 
−
*lllDataDifferenceCalc.h
 
−
*lllDataEquatorAdd.h
 
−
*lllDataExtract.h
 
−
*lllDataFit.h
 
−
*lllDataFitAndAverage.h
 
−
*lllDataFitParamInverse.h
 
−
*lllDataLowPassFiltering.h
 
−
*lllDataMergeDifferentN.h
 
−
*lllDataRescaling.h
 
−
*lllDatarMaxLimit.h
 
−
*lllExtract.h
 
−
*lllExtractCtfinfFileCreate.h
 
−
*lllExtractdYEstimate.h
 
−
*lltlg2mrc.h
 
−
*lmolvie.h
 
−
*lmolvieProteinStatus.h
 
−
*lmolvieViewer.h
 
−
*lmrc2Dto3D.h
 
−
*lmrc3Dto2D.h
 
  
−
*lpdb2mrcInfo.h
 
−
*lpdbCoord.h
 
−
*lpdbCoordInfo.h
 
−
*lpdbSelectedAtom.h
 
−
*lpdbSurface.h
 
−
*ltlgData.h
 
−
*mapFile.h
 
−
*marching_cubes.h
 
−
*molvieDefault.h
 
−
*molvieDockDefault.h
 
−
*molvieFlightDefault.h
 
−
*molvieMrcViewerDefault.h
 
−
*molvieProjectionDefault.h
 
−
*molvieViewerDefault.h
 
−
*nr2.h
 
−
*openGL.h
 
  
−
*powerspectraTangentLine.h
+
*[[DisplayListNumber(API)]]
−
*psFile.h
+
 
−
*tgaFile.h
+
 
−
*tiff.h
+
*[[Test(API)]]
−
*tiffio.h
+
*[[aa(API)]]
−
*tkImgFmtMRC.h
+
 
−
*tkctfInfo.h
+
 
−
*transform.h
+
*[[bar(API)]]
 +
*[[marching_cubes(API)]]
 +
 
 +
 
 +
*[[keos_proc(API)]]
 +
*[[khorosData(API)]]
 +
 
 +
*[[lFRET(API)]]
 +
*[[lLcalculation(API)]]
 +
 
 +
*[[fft2d(API)]]
 +
*[[fftn(API)]]
 +
*[[transform(API)]]

2015年3月17日 (火) 07:36時点における最新版

機能別ライブラリ(API)一覧では、機能毎にＡＰＩを分類して示します。

GeneralクラスのAPI

一般的なツール

Eosのため

特殊な値

ファイル

ソケット

PVM

記憶

文字列

ベクトル

配列(Array)

配列を取り扱うためのオブジェクトです。


３次元変換

３次元画像変換の為の4x4次元の配列です。

乱数

クラスター


結晶

２次元地図

AI（人工知能）

並列化

eosPThread(API)

eosCuda(API)

DataManipクラスのAPI

mrcImageに関連したライブラリ

　mrcImageは、Eosにおける標準画像形式です。画像フォーマットとしてファイルの形式に対応しているだけではなく、全てのコマンド内でこの形式の構造体（クラス）により画像を取り扱っています。

入出力等の低水準ライブラリ

  • mrcImage(API): mrcImage型の画像を取り扱うための低水準API

ctfInfoに関連したAPI群

画像フォーマット変換用


らせん対称性をもちいた三次元再構成のためのAPI群

PDBに関連したライブラリ


DataExpressクラスのAPI

Tcl/Tk/VTKに関するAPI

ポストスクリプトファイルに対するAPI


等高線

ALSA（音源）

OpenGL

Molvieに関するAPI

AVSファイル

gifファイル

MachineManipクラスのAPI

電子顕微鏡HF2000の制御のためのAPI

未分類





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