「コマンド一覧」の版間の差分

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(ページの作成: Eosに実装されているコマンドの一覧。 *CTFDetermination *CheckCommonLineData *CheckOfOrientation *CheckOrientationByDegree *Chie *[[Com...)
 
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*[[RTeranishi]]
 
*[[RTeranishi]]
 
*[[StereoDisplay]]
 
*[[StereoDisplay]]
−
*[[TestForLcalculationOfOrientationSearchBySimultaneousMinimization
+
*[[TestForLcalculationOfOrientationSearchBySimultaneousMinimization]]
−
*[[Visualmake
+
*[[Visualmake]]
−
*[[WeightCalculationOfCommonLineSearch
+
*[[WeightCalculationOfCommonLineSearch]]
−
*[[WeightCalculationOfCommonLineSearchByAllSinogram
+
*[[WeightCalculationOfCommonLineSearchByAllSinogram]]
−
*[[WeigthCaluculationOfCommonLineCalculation
+
*[[WeigthCaluculationOfCommonLineCalculation]]
−
*[[angleMatchTest_k
+
*[[angleMatchTest_k]]
−
*[[anglediffcalc
+
*[[anglediffcalc]]
−
*[[anglediffchk
+
*[[anglediffchk]]
−
*[[array2mrc
+
*[[array2mrc]]
−
*[[bin2mrc
+
*[[bin2mrc]]
−
*[[class
+
*[[class]]
−
*[[clusterLog2ToLog
+
*[[clusterLog2ToLog]]
−
*[[clusterLogASCII2Binary
+
*[[clusterLogASCII2Binary]]
−
*[[clusterShow
+
*[[clusterShow]]
−
*[[coordRotation
+
*[[coordRotation]]
−
*[[ctfDeterminationFromMultiImage
+
*[[ctfDeterminationFromMultiImage]]
−
*[[ctfDeterminationFromPhaseComparison
+
*[[ctfDeterminationFromPhaseComparison]]
−
*[[ctfDeterminationFromThonRing
+
*[[ctfDeterminationFromThonRing]]
−
*[[ctfDetermine
+
*[[ctfDetermine]]
−
*[[ctfDisplay
+
*[[ctfDisplay]]
−
*[[ctfEnvelopFunction
+
*[[ctfEnvelopFunction]]
−
*[[ctfFunction
+
*[[ctfFunction]]
−
*[[ctfFunctionServer
+
*[[ctfFunctionServer]]
−
*[[ctfInfoSet
+
*[[ctfInfoSet]]
−
*[[ctfMultiFunction
+
*[[ctfMultiFunction]]
−
*[[ctfWeightMapCreation
+
*[[ctfWeightMapCreation]]
−
*[[ctfZeroPoint
+
*[[ctfZeroPoint]]
−
*[[cufft
+
*[[cufft]]
−
*[[dataAnalysis_kayabuki
+
*[[dataAnalysis_kayabuki]]
−
*[[dcdAtomChangeDistanceFromAtom
+
*[[dcdAtomChangeDistanceFromAtom]]
−
*[[dcdAtomDistanceDistribution
+
*[[dcdAtomDistanceDistribution]]
−
*[[dcdCompareCA
+
*[[dcdCompareCA]]
−
*[[dcdDistanceAtomBetweenAtom
+
*[[dcdDistanceAtomBetweenAtom]]
−
*[[dcdFilePrint
+
*[[dcdFilePrint]]
−
*[[dcdInfo
+
*[[dcdInfo]]
−
*[[dcdSelectAtoms
+
*[[dcdSelectAtoms]]
−
*[[dcdSerectAtom
+
*[[dcdSerectAtom]]
−
*[[dcdTest
+
*[[dcdTest]]
−
*[[dcdTimeSeriesBehavior
+
*[[dcdTimeSeriesBehavior]]
−
*[[defocusDeterminationFromThonRing
+
*[[defocusDeterminationFromThonRing]]
−
*[[dos2unix
+
*[[dos2unix]]
−
*[[electronWaveLength
+
*[[electronWaveLength]]
−
*[[emData2mrc
+
*[[emData2mrc]]
−
*[[energyTransferModelCheck
+
*[[energyTransferModelCheck]]
−
*[[energyTransferModelResultCheck
+
*[[energyTransferModelResultCheck]]
−
*[[fft2d
+
*[[fft2d]]
−
*[[gmolvie
+
*[[gmolvie]]
−
*[[hf2000Init
+
*[[hf2000Init]]
−
*[[hf2000LenzCurrent
+
*[[hf2000LenzCurrent]]
−
*[[hf2000SpecimenPosition
+
*[[hf2000SpecimenPosition]]
−
*[[hiromi
+
*[[hiromi]]
−
*[[hiroshiImageProcessing
+
*[[hiroshiImageProcessing]]
−
*[[homology2PG
+
*[[homology2PG]]
−
*[[hostCondition
+
*[[hostCondition]]
−
*[[imagesView
+
*[[imagesView]]
−
*[[ip2mrc
+
*[[ip2mrc]]
−
*[[itami
+
*[[itami]]
−
*[[kayabuki
+
*[[kayabuki]]
−
*[[khorosFilterGenerate
+
*[[khorosFilterGenerate]]
−
*[[konson3
+
*[[konson3]]
−
*[[kuma
+
*[[kuma]]
−
*[[largeIPInfo
+
*[[largeIPInfo]]
−
*[[ll2ltlg
+
*[[ll2ltlg]]
−
*[[llDataAverage
+
*[[llDataAverage]]
−
*[[llDataAxisSearch
+
*[[llDataAxisSearch]]
−
*[[llDataCTFCompensate
+
*[[llDataCTFCompensate]]
−
*[[llDataCompare
+
*[[llDataCompare]]
−
*[[llDataContributionCalcDifferentN
+
*[[llDataContributionCalcDifferentN]]
−
*[[llDataDump
+
*[[llDataDump]]
−
*[[llDataEquatorAdd
+
*[[llDataEquatorAdd]]
−
*[[llDataExtract
+
*[[llDataExtract]]
−
*[[llDataFit
+
*[[llDataFit]]
−
*[[llDataFitServer
+
*[[llDataFitServer]]
−
*[[llDataInfo
+
*[[llDataInfo]]
−
*[[llDataLowPassFiltering
+
*[[llDataLowPassFiltering]]
−
*[[llDataMultiCTFCompensation
+
*[[llDataMultiCTFCompensation]]
−
*[[llDataNEstimation
+
*[[llDataNEstimation]]
−
*[[llDataNormalization
+
*[[llDataNormalization]]
−
*[[llDataPrint
+
*[[llDataPrint]]
−
*[[llDataRescaling
+
*[[llDataRescaling]]
−
*[[llDataResolutionCheck
+
*[[llDataResolutionCheck]]
−
*[[llDataRotation
+
*[[llDataRotation]]
−
*[[llDataSelectionEstimation
+
*[[llDataSelectionEstimation]]
−
*[[llDataSeparate
+
*[[llDataSeparate]]
−
*[[llDataWeightSet
+
*[[llDataWeightSet]]
−
*[[llDatarMaxLimit
+
*[[llDatarMaxLimit]]
−
*[[llExtract
+
*[[llExtract]]
−
*[[llExtractCtfinfFileCreate
+
*[[llExtractCtfinfFileCreate]]
−
*[[llExtractCtrlFileCreate
+
*[[llExtractCtrlFileCreate]]
−
*[[llExtractWithLayerSeparation
+
*[[llExtractWithLayerSeparation]]
−
*[[llExtractWithLayerSeparationCtrlFileCreate
+
*[[llExtractWithLayerSeparationCtrlFileCreate]]
−
*[[llExtractWithLayerSeparationCtrlFileCreateMyosin
+
*[[llExtractWithLayerSeparationCtrlFileCreateMyosin]]
−
*[[llExtractWithLayerSeparationFilamentInfo
+
*[[llExtractWithLayerSeparationFilamentInfo]]
−
*[[llExtractWithLayerSeparationResultTwoSubsetsByPhiAngle
+
*[[llExtractWithLayerSeparationResultTwoSubsetsByPhiAngle]]
−
*[[llExtractWithLayerSeparationServer
+
*[[llExtractWithLayerSeparationServer]]
−
*[[llExtractWithLayerSeparationSingle
+
*[[llExtractWithLayerSeparationSingle]]
−
*[[ltlg2mrc
+
*[[ltlg2mrc]]
−
*[[ltlg2ps
+
−
*[[ltlgDataInfo
+
−
*[[mallocCheck
+
−
*[[matrix3DEulerAngleTransform
+
−
*[[matrix3DFromEulerAngle
+
−
*[[matrix3DInverse
+
−
*[[matrix3DToEulerAngle
+
−
*[[miho2
+
−
*[[moi2mrc
+
−
*[[molecularEnvelopeResampling
+
−
*[[molecularWeightCalc
+
−
*[[molvie
+
−
*[[molvieDock
+
−
*[[molvieFlight
+
−
*[[molvieMrcViewer
+
−
*[[molvieProjection
+
−
*[[molvieViewer
+
−
*[[mrc2Dto3D
+
−
*[[mrc2Dto3DforVariation
+
−
*[[mrc2dsn6
+
−
*[[mrc2fld
+
−
*[[mrc2gif
+
−
*[[mrc2hdf
+
−
*[[mrc2lattice
+
−
*[[mrc2map
+
−
*[[mrc2pov
+
−
*[[mrc2tiff
+
−
*[[mrc2viff
+
−
*[[mrc3DExtractZ
+
−
*[[mrc3Dto2D
+
−
*[[mrcFETnormalizeBySD
+
−
*[[mrcFFTBandPassFilter
+
−
*[[mrcFFTCTFCompensation
+
−
*[[mrcFFTDigitize
+
−
*[[mrcFFTExpression
+
−
*[[mrcFFTFibreDiagram
+
−
*[[mrcFFTFiltering
+
−
*[[mrcFFTIQEstimation
+
−
*[[mrcFFTInfo
+
−
*[[mrcFFTLayerLineCheck
+
−
*[[mrcFFTMedianFilter
+
−
*[[mrcFFTProjection
+
−
*[[mrcFFTResampling
+
−
*[[mrcFFTShellInfo
+
−
*[[mrcFFTSizeChange
+
−
*[[mrcFFTSpectrum
+
−
*[[mrcFFTXFiltering
+
−
*[[mrcFFTplainreduce
+
−
mrcFTMeridianEquatorRedece
+
−
mrcImage1DProjectionfrom2D
+
−
mrcImage1dAverageByCorrelation
+
−
mrcImage1dCutAverage
+
−
mrcImage1dShiftAverageByAnnealing
+
−
mrcImage1dShiftByCorrelation
+
−
mrcImage2DBackProjection
+
−
mrcImage2DProjection
+
−
mrcImage2pdb
+
−
mrcImage3DHighResoEmphasis
+
−
mrcImage3DPad
+
−
mrcImage3DPad2
+
−
mrcImage3DWindowing
+
−
mrcImageAbnormalValueRemove
+
−
mrcImageActinSingleParticleAnalysis
+
−
mrcImageAdaptiveBinalization
+
−
mrcImageAdd
+
−
mrcImageAddValue
+
−
mrcImageAreaCalc
+
−
mrcImageAssignedToTFofPDB
+
−
mrcImageAutoCorrelationWithWindowing
+
−
mrcImageAutoFilamentExtract
+
−
mrcImageAutoFilamentExtractResultAnalysis
+
−
mrcImageAutoRotationCorrelation
+
−
mrcImageAutoRotationCorrelation3D
+
−
mrcImageAutoRotationCorrelationResultPrint
+
−
mrcImageAverage
+
−
mrcImageBandPassFilter
+
−
mrcImageBinalization
+
−
mrcImageBlockMerge
+
−
mrcImageBoundaryInfo
+
−
mrcImageBtest
+
−
mrcImageCCDNoiseRemove
+
−
mrcImageCTFCompensation
+
−
mrcImageCTFCompensationForTiltImage
+
−
mrcImageCTFDetermination
+
−
mrcImageCTFObservation
+
−
mrcImageCTFSN
+
−
mrcImageCVE
+
−
mrcImageCenterDensityChange
+
−
mrcImageCenterGet
+
−
mrcImageCenterOfMassCalculate
+
−
mrcImageCircumferentialProjection
+
−
mrcImageClusterAnalysis
+
−
mrcImageColoring
+
−
mrcImageColorlizing
+
−
mrcImageCommonLineSearch
+
−
mrcImageConnection
+
−
mrcImageConnectivityNumberCalc
+
−
mrcImageContourSurfaceCreate
+
−
mrcImageCoordinateChange
+
−
mrcImageCoreImageCalc
+
−
mrcImageCorrelation
+
−
mrcImageCorrelationInFourierSpace
+
−
mrcImageCorrelationServer
+
−
mrcImageCorrelationWithCTFCompensation
+
−
mrcImageCrystalCreate
+
−
mrcImageCutAndSetInArray
+
−
mrcImageCylinderSection
+
−
mrcImageDeadPixelCorrection
+
−
mrcImageDensityChangeEstimation
+
−
mrcImageDensityInfo
+
−
mrcImageDensityNormalization
+
−
mrcImageDensityNormalizationByImage
+
−
mrcImageDevideIntoTwoImages
+
−
mrcImageDisplayDensityAsTempFactor
+
−
mrcImageDistanceConversion
+
−
mrcImageDivideInfoForTomography
+
−
mrcImageDivideIntoTwoImages
+
−
mrcImageEdgeImageGet
+
−
mrcImageEnhancementWithFuzzySets
+
−
mrcImageEstimateTiltImage
+
−
mrcImageExpression
+
−
mrcImageFFT
+
−
mrcImageFFTLayerLineExtraction
+
−
mrcImageFOMCalc
+
−
mrcImageFTest
+
−
mrcImageFeatureExtraction
+
−
mrcImageFilamentSearch
+
−
mrcImageFilterCreate
+
−
mrcImageFilteringbyFile
+
−
mrcImageFilteringbyFileForVariance
+
−
mrcImageFourierPowerSpectrum
+
−
mrcImageFourierShellCorrelation
+
−
mrcImageFractalFourierShellCorrelation
+
−
mrcImageFractalFrourierShellCorrelation
+
−
mrcImageGaussDisc
+
−
mrcImageGaussSphere
+
−
mrcImageHeaderChange
+
−
mrcImageHelicalAveraging
+
−
mrcImageHelicalMappingFrom2DImage
+
−
mrcImageHelicalMasking
+
−
mrcImageHelicalMaskingBy2DImage
+
−
mrcImageHelicalProjection
+
−
mrcImageHighPassFilter
+
−
mrcImageHighlighting
+
−
mrcImageInfo
+
−
mrcImageInverseRadonTransform
+
−
mrcImageLabeling
+
−
mrcImageLowPassFilter
+
−
mrcImageMagnificationChange
+
−
mrcImageMake2DArrayImage
+
−
mrcImageMakeCylinder
+
−
mrcImageMakeDump
+
−
mrcImageMakeFromTextFile
+
−
mrcImageMakeSphere
+
−
mrcImageMappingtoPdb
+
−
mrcImageMasking
+
−
mrcImageMaskingByImage
+
−
mrcImageMergebyside
+
−
mrcImageMirroring
+
−
mrcImageModeChange
+
−
mrcImageModelCreate
+
−
mrcImageModelSubfilamentsCreate
+
−
mrcImageMontageCreate
+
−
mrcImageMove
+
−
mrcImageMultiCTFCompensation
+
−
mrcImageMultiCTFDetermination
+
−
mrcImageMultiplying
+
−
mrcImageMultiplyingbyFile
+
−
mrcImageNeuralNetLearning
+
−
mrcImageNeuralNetParticleExtraction
+
−
mrcImageNeuralNetParticleLearning
+
−
mrcImageNfoldAxisSearch
+
−
mrcImageNoiseAdd
+
−
mrcImageNoiseCreate
+
−
mrcImageNoiseReductionByRelaxation
+
−
mrcImageNormalDistributionTest
+
−
mrcImageNormalizedSubstraction
+
−
mrcImageNormalizedSubtraction
+
−
mrcImageNormalizing
+
−
mrcImageNullImageCreate
+
−
mrcImageOddBoxel
+
−
mrcImageOneLineSimilarityCalc
+
−
mrcImageOrientationSearch
+
−
mrcImageOrientationSearchByHigherSelection
+
−
mrcImageOrientationSearchByHybridization
+
−
mrcImageOrientationSearchBySimultaneousMinimization
+
−
mrcImagePCA
+
−
mrcImagePad
+
−
mrcImagePhaseCTFCompensationFromCTFINFO
+
−
mrcImagePixelDataGet
+
−
mrcImagePolyROI
+
−
mrcImagePosterization
+
−
mrcImagePrint
+
−
mrcImagePrint3D
+
−
mrcImageProjection
+
−
mrcImagePut3D
+
−
mrcImageROI
+
−
mrcImageROI3D
+
−
mrcImageROIs
+
−
mrcImageROItoPCAoutputImage
+
−
mrcImageRadialDistribution
+
−
mrcImageRadonTransform
+
−
mrcImageRealValueAdd
+
−
mrcImageRectangleGet
+
−
mrcImageRectangleGetByCorrelation
+
−
mrcImageRefConv2D
+
−
mrcImageRefCreate
+
−
mrcImageRefFFTConv2D
+
−
mrcImageRefScaleChangeWithPad
+
−
mrcImageResolutionEstimateForFilaments
+
−
mrcImageReverse
+
−
mrcImageRotation
+
−
mrcImageRotation3D
+
−
mrcImageSN
+
−
mrcImageSamplingUnitChange
+
−
mrcImageScalarAdd
+
−
mrcImageSectionGet
+
−
mrcImageSetFunction
+
−
mrcImageShapePCA
+
−
mrcImageShift
+
−
mrcImageShiftFollowingGC
+
−
mrcImageShrink
+
−
mrcImageSimilarImageSearch
+
−
mrcImageSimilarityEstimate
+
−
mrcImageSinogramCorrelation
+
−
mrcImageSinogramCreate
+
−
mrcImageSinogramFFT
+
−
mrcImageSmoothing
+
−
mrcImageSolventFlattening
+
−
mrcImageSphere
+
−
mrcImageSplit
+
−
mrcImageSquare
+
−
mrcImageStack
+
−
mrcImageStandardDeviation
+
−
mrcImageSubstraction
+
−
mrcImageSubtraction
+
−
mrcImageSuperResolution
+
−
mrcImageSymmetryAverage
+
−
mrcImageSymmetryCentreFind
+
−
mrcImageSymmetryFind
+
−
mrcImageTTest
+
−
mrcImageTfunction
+
−
mrcImageTiltAxisSearch
+
−
mrcImageToNAMDConstantForces
+
−
mrcImageTrans
+
−
mrcImageTransepose
+
−
mrcImageTransformDescartesIntoPolar
+
−
mrcImageTranspose
+
−
mrcImageTwoImageTest
+
−
mrcImageUnbentROI
+
−
mrcImageUnexpectedMassFromPDB
+
−
mrcImageUntwist
+
−
mrcImageVarianceAnalysis
+
−
mrcImageVarianceMap
+
−
mrcImageVolumeCalc
+
−
mrcImageWindowing
+
−
mrcImageZPad
+
−
mrcImagepdbFileReduce
+
−
mrcImagesSinogramCorrelation
+
−
mrcImagestoRef
+
−
mrcInfo
+
−
mrcInfoSet
+
−
mrcManipulate_kaya
+
−
mrcMask
+
−
mrcMeanYlinePos
+
−
mrcMirrorImageCreate
+
−
mrcRadon2Dto3D
+
−
mrcRefCorEstimate
+
−
mrcRefCorModify
+
−
mrcRefCoreGet
+
−
mrcRefCorrelation
+
−
mrcRefCorrelationConv
+
−
mrcRefEstimate
+
−
mrcRefFFTConvert
+
−
mrcRefHeaderCreate
+
−
mrcRefHighPassFilter
+
−
mrcRefImageCorrelation
+
−
mrcRefImageOmegaCorrelation
+
−
mrcRefImagepwzCorEstimate
+
−
mrcRefImagepwzCorModify
+
−
mrcRefImagepwzCorPeakFind
+
−
mrcRefImagepwzCorSmoothing
+
−
mrcRefImagepwzCorrelation
+
−
mrcRefImagepwzCorrelationByFFT
+
−
mrcRefImagexaFit
+
−
mrcRefLowPassFilter
+
−
mrcRefNoiseAdd
+
−
mrcRefNormalizing
+
−
mrcRefPhaseImageCreate
+
−
mrcRefSmoothing
+
−
mrcRefz1ImageCorrelation
+
−
mrcSinogramFET
+
−
mrcSinogramFETcalcSDforNormalize
+
−
mrcSinogramFETcalcWeight
+
−
mrcSinogramFETcorrelationMap
+
−
mrcSinogramFETnormalizedMap
+
−
mrcSinogramFETreferredCorrelation
+
−
mrcSinogramFETsmoothParameterMatching
+
−
mrcView
+
−
muscleSimulation
+
−
myo
+
−
nakamichi2009
+
−
obj3Don2DImageView
+
−
openGLTest
+
−
pdb2SketchMacro
+
−
pdb2bender
+
−
pdb2mrc
+
−
pdb2mrc2d
+
−
pdb2mrc2dWithCTF
+
−
pdb2mrcWithCTF
+
−
pdb2ucd
+
−
pdb3DOn2DImageLayerView
+
−
pdbAtomSection
+
−
pdbCAOnly
+
−
pdbChargeFit
+
−
pdbCoordAdd
+
−
pdbCrystalCreate
+
−
pdbDisplay
+
−
pdbFileMerge
+
−
pdbHelix
+
−
pdbHomologySearch
+
−
pdbInfo
+
−
pdbMatrixCreate
+
−
pdbMolecularInterfaceFind
+
−
pdbMove
+
−
pdbNAMDRestraintCreate
+
−
pdbNearAtomListShow
+
−
pdbOneProteinGet
+
−
pdbPCA
+
−
pdbProteinIDSet
+
−
pdbRhoFit
+
−
pdbRhoFitCoiledCoil
+
−
pdbRhoFitTm
+
−
pdbRotation
+
−
pdbSecondaryStructurePrint
+
−
pdbShapeFit
+
−
pdbSurface
+
−
pdbTempFactorSet
+
−
pdbTrans
+
−
pdbTwoProteinFit
+
−
pdbView
+
−
pdbWaterAdd
+
−
pgDataBaseSelectServer
+
−
pgJournalSelect
+
−
pgJournalSelectCORBAClient
+
−
pgJournalSelectCORBAServer
+
−
pgMemoSelectCORBAServer
+
−
pgSelect
+
−
pointAffineTransform
+
−
psFileMerge
+
−
psFilePageMerge
+
−
randomNormalGet
+
−
randomUniformGet
+
−
rasmonyo
+
−
reoleo
+
−
ryuuhaku
+
−
smolet
+
−
tacyas
+
−
takahiro
+
−
test
+
−
tgaInfo
+
−
tiff2mrc
+
−
tiltInfoDetermine
+
−
vector2pdb
+
−
vectorImageNearestNeighborMethod
+
−
yajinori
+
−
yamashita09
+
−
yoshinori
+

2010年11月9日 (火) 03:03時点における版

Eosに実装されているコマンドの一覧。