Difference between revisions of "List of command"
From EosPedia
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== Alphabetical Command List == | == Alphabetical Command List == | ||
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*[[mrc2Dto3D]] | *[[mrc2Dto3D]] | ||
*[[mrc2Dto3DforVariation]] | *[[mrc2Dto3DforVariation]] | ||
| Line 137: | Line 9: | ||
*[[mrc2lattice]] | *[[mrc2lattice]] | ||
*[[mrc2map]] | *[[mrc2map]] | ||
| + | *[[mrc2mrc]] | ||
*[[mrc2pov]] | *[[mrc2pov]] | ||
*[[mrc2tiff]] | *[[mrc2tiff]] | ||
| Line 180: | Line 53: | ||
*[[mrcImageAddValue]] | *[[mrcImageAddValue]] | ||
*[[mrcImageAreaCalc]] | *[[mrcImageAreaCalc]] | ||
| + | *[[mrcImageAsProbability]] | ||
*[[mrcImageAssignedToTFofPDB]] | *[[mrcImageAssignedToTFofPDB]] | ||
*[[mrcImageAutoCorrelationWithWindowing]] | *[[mrcImageAutoCorrelationWithWindowing]] | ||
| Line 189: | Line 63: | ||
*[[mrcImageAverage]] | *[[mrcImageAverage]] | ||
*[[mrcImageBandPassFilter]] | *[[mrcImageBandPassFilter]] | ||
| + | *[[mrcImageBilateralFilter]] | ||
*[[mrcImageBinalization]] | *[[mrcImageBinalization]] | ||
*[[mrcImageBlockMerge]] | *[[mrcImageBlockMerge]] | ||
| + | *[[mrcImageBottomHatTransform]] | ||
*[[mrcImageBoundaryInfo]] | *[[mrcImageBoundaryInfo]] | ||
*[[mrcImageBtest]] | *[[mrcImageBtest]] | ||
| Line 204: | Line 80: | ||
*[[mrcImageCenterOfMassCalculate]] | *[[mrcImageCenterOfMassCalculate]] | ||
*[[mrcImageCircumferentialProjection]] | *[[mrcImageCircumferentialProjection]] | ||
| + | *[[mrcImageClosing]] | ||
*[[mrcImageClusterAnalysis]] | *[[mrcImageClusterAnalysis]] | ||
*[[mrcImageColoring]] | *[[mrcImageColoring]] | ||
| Line 210: | Line 87: | ||
*[[mrcImageConnectivityNumberCalc]] | *[[mrcImageConnectivityNumberCalc]] | ||
*[[mrcImageContourSurfaceCreate]] | *[[mrcImageContourSurfaceCreate]] | ||
| + | *[[mrcImageConvolution]] | ||
*[[mrcImageCoordinateChange]] | *[[mrcImageCoordinateChange]] | ||
*[[mrcImageCoreImageCalc]] | *[[mrcImageCoreImageCalc]] | ||
| Line 220: | Line 98: | ||
*[[mrcImageCylinderSection]] | *[[mrcImageCylinderSection]] | ||
*[[mrcImageDeadPixelCorrection]] | *[[mrcImageDeadPixelCorrection]] | ||
| + | *[[mrcImageDeconvolution]] | ||
*[[mrcImageDensityChangeEstimation]] | *[[mrcImageDensityChangeEstimation]] | ||
*[[mrcImageDensityInfo]] | *[[mrcImageDensityInfo]] | ||
*[[mrcImageDensityNormalization]] | *[[mrcImageDensityNormalization]] | ||
*[[mrcImageDensityNormalizationByImage]] | *[[mrcImageDensityNormalizationByImage]] | ||
| + | *[[mrcImageDilation]] | ||
*[[mrcImageDisplayDensityAsTempFactor]] | *[[mrcImageDisplayDensityAsTempFactor]] | ||
*[[mrcImageDistanceConversion]] | *[[mrcImageDistanceConversion]] | ||
*[[mrcImageDivideInfoForTomography]] | *[[mrcImageDivideInfoForTomography]] | ||
*[[mrcImageDivideIntoTwoImages]] | *[[mrcImageDivideIntoTwoImages]] | ||
| + | *[[mrcImageDividedByFile]] | ||
| + | *[[mrcImageEdgeEnhancement]] | ||
*[[mrcImageEdgeImageGet]] | *[[mrcImageEdgeImageGet]] | ||
*[[mrcImageEnhancementWithFuzzySets]] | *[[mrcImageEnhancementWithFuzzySets]] | ||
| + | *[[mrcImageErosion]] | ||
*[[mrcImageEstimateTiltImage]] | *[[mrcImageEstimateTiltImage]] | ||
*[[mrcImageExpression]] | *[[mrcImageExpression]] | ||
| Line 241: | Line 124: | ||
*[[mrcImageFilteringbyFile]] | *[[mrcImageFilteringbyFile]] | ||
*[[mrcImageFilteringbyFileForVariance]] | *[[mrcImageFilteringbyFileForVariance]] | ||
| + | *[[mrcImageFloating]] | ||
*[[mrcImageFourierPowerSpectrum]] | *[[mrcImageFourierPowerSpectrum]] | ||
*[[mrcImageFourierShellCorrelation]] | *[[mrcImageFourierShellCorrelation]] | ||
| Line 259: | Line 143: | ||
*[[mrcImageInverseRadonTransform]] | *[[mrcImageInverseRadonTransform]] | ||
*[[mrcImageLabeling]] | *[[mrcImageLabeling]] | ||
| + | *[[mrcImageLogicalOperation]] | ||
*[[mrcImageLowPassFilter]] | *[[mrcImageLowPassFilter]] | ||
*[[mrcImageMagnificationChange]] | *[[mrcImageMagnificationChange]] | ||
| Line 293: | Line 178: | ||
*[[mrcImageOddBoxel]] | *[[mrcImageOddBoxel]] | ||
*[[mrcImageOneLineSimilarityCalc]] | *[[mrcImageOneLineSimilarityCalc]] | ||
| + | *[[mrcImageOpening]] | ||
*[[mrcImageOrientationSearch]] | *[[mrcImageOrientationSearch]] | ||
*[[mrcImageOrientationSearchByHigherSelection]] | *[[mrcImageOrientationSearchByHigherSelection]] | ||
| Line 299: | Line 185: | ||
*[[mrcImagePCA]] | *[[mrcImagePCA]] | ||
*[[mrcImagePad]] | *[[mrcImagePad]] | ||
| + | *[[mrcImagePanoramaCreate]] | ||
*[[mrcImageParticleCandidateExtract]] | *[[mrcImageParticleCandidateExtract]] | ||
*[[mrcImagePeakSearch]] | *[[mrcImagePeakSearch]] | ||
| Line 315: | Line 202: | ||
*[[mrcImageRadialDistribution]] | *[[mrcImageRadialDistribution]] | ||
*[[mrcImageRadonTransform]] | *[[mrcImageRadonTransform]] | ||
| + | *[[mrcImageRandomParticlesImageCreate]] | ||
*[[mrcImageRealValueAdd]] | *[[mrcImageRealValueAdd]] | ||
*[[mrcImageRectangleGet]] | *[[mrcImageRectangleGet]] | ||
| Line 331: | Line 219: | ||
*[[mrcImageSectionGet]] | *[[mrcImageSectionGet]] | ||
*[[mrcImageSetFunction]] | *[[mrcImageSetFunction]] | ||
| + | *[[mrcImageShapeOrientation]] | ||
*[[mrcImageShapePCA]] | *[[mrcImageShapePCA]] | ||
| + | *[[mrcImageShapePCAFit]] | ||
*[[mrcImageShift]] | *[[mrcImageShift]] | ||
*[[mrcImageShiftFollowingGC]] | *[[mrcImageShiftFollowingGC]] | ||
| Line 344: | Line 234: | ||
*[[mrcImageSolventFlattening]] | *[[mrcImageSolventFlattening]] | ||
*[[mrcImageSphere]] | *[[mrcImageSphere]] | ||
| + | *[[mrcImageSphereCheck]] | ||
*[[mrcImageSplit]] | *[[mrcImageSplit]] | ||
*[[mrcImageSquare]] | *[[mrcImageSquare]] | ||
| Line 358: | Line 249: | ||
*[[mrcImageTiltAxisSearchHelp]] | *[[mrcImageTiltAxisSearchHelp]] | ||
*[[mrcImageToNAMDConstantForces]] | *[[mrcImageToNAMDConstantForces]] | ||
| + | *[[mrcImageToPointsSet]] | ||
| + | *[[mrcImageTopHatTransform]] | ||
*[[mrcImageTrans]] | *[[mrcImageTrans]] | ||
*[[mrcImageTransformDescartesIntoPolar]] | *[[mrcImageTransformDescartesIntoPolar]] | ||
| Line 374: | Line 267: | ||
*[[mrcImagesSinogramCorrelation]] | *[[mrcImagesSinogramCorrelation]] | ||
*[[mrcImagestoRef]] | *[[mrcImagestoRef]] | ||
| + | *[[mrcImateToPointsSet]] | ||
*[[mrcInfo]] | *[[mrcInfo]] | ||
*[[mrcInfoSet]] | *[[mrcInfoSet]] | ||
| Line 433: | Line 327: | ||
*[[pdbInfo]] | *[[pdbInfo]] | ||
*[[pdbListRMSDCalc]] | *[[pdbListRMSDCalc]] | ||
| + | *[[pdbListVectorCalc]] | ||
*[[pdbMatrixCreate]] | *[[pdbMatrixCreate]] | ||
*[[pdbMolecularInterfaceFind]] | *[[pdbMolecularInterfaceFind]] | ||
| Line 453: | Line 348: | ||
*[[pdbView]] | *[[pdbView]] | ||
*[[pdbWaterAdd]] | *[[pdbWaterAdd]] | ||
| + | *[[CheckCommonLineData]] | ||
| + | *[[CheckOfOrientation]] | ||
| + | *[[CheckOrientationByDegree]] | ||
| + | *[[CommonLineCalculation]] | ||
| + | *[[CommonLineRankCalc_k]] | ||
| + | *[[Descartes2Polar]] | ||
| + | *[[Display2]] | ||
| + | *[[Display3]] | ||
| + | *[[Eos]] | ||
| + | *[[EvaluateCorrelationMapwithCommonLine]] | ||
| + | *[[FETOrientationSearchByAnnealing]] | ||
| + | *[[FETOrientationSearchByFeatureAlignment]] | ||
| + | *[[FETmapOrientationSearchBySimultaneousFitting]] | ||
| + | *[[FETsmallMapSetCreate_forSimultaneousMinimization]] | ||
| + | *[[LCalculationForOrientationSearch]] | ||
| + | *[[Polar2Descartes]] | ||
| + | *[[ProjectionDirectionMapCreate]] | ||
| + | *[[StereoDisplay]] | ||
| + | *[[TestForLcalculationOfOrientationSearchBySimultaneousMinimization]] | ||
| + | *[[Visualmake]] | ||
| + | *[[WeightCalculationOfCommonLineSearch]] | ||
| + | *[[WeightCalculationOfCommonLineSearchByAllSinogram]] | ||
| + | *[[WeigthCaluculationOfCommonLineCalculation]] | ||
| + | *[[angleMatchTest_k]] | ||
| + | *[[anglediffcalc]] | ||
| + | *[[anglediffchk]] | ||
| + | *[[array2mrc]] | ||
| + | *[[bin2mrc]] | ||
| + | *[[bmp2mrc]] | ||
| + | *[[bmpFileInfo]] | ||
| + | *[[calcCommonLine]] | ||
| + | *[[clusterLog2ToLog]] | ||
| + | *[[clusterLogASCII2Binary]] | ||
| + | *[[clusterShow]] | ||
| + | *[[commonLinesSearchByVoting]] | ||
| + | *[[coordRotation]] | ||
| + | *[[ctfDeterminationFromMultiImage]] | ||
| + | *[[ctfDeterminationFromPhaseComparison]] | ||
| + | *[[ctfDeterminationFromThonRing]] | ||
| + | *[[ctfDetermine]] | ||
| + | *[[ctfDisplay]] | ||
| + | *[[ctfEnvelopFunction]] | ||
| + | *[[ctfFunction]] | ||
| + | *[[ctfFunctionServer]] | ||
| + | *[[ctfInfoSet]] | ||
| + | *[[ctfMultiFunction]] | ||
| + | *[[ctfWeightMapCreation]] | ||
| + | *[[ctfZeroPoint]] | ||
| + | *[[cufft]] | ||
| + | *[[dataAnalysis_kayabuki]] | ||
| + | *[[dcdAtomChangeDistanceFromAtom]] | ||
| + | *[[dcdAtomDistanceDistribution]] | ||
| + | *[[dcdCompareCA]] | ||
| + | *[[dcdDistanceAtomBetweenAtom]] | ||
| + | *[[dcdFilePrint]] | ||
| + | *[[dcdInfo]] | ||
| + | *[[dcdSelectAtoms]] | ||
| + | *[[dcdSerectAtom]] | ||
| + | *[[dcdTest]] | ||
| + | *[[dcdTimeSeriesBehavior]] | ||
| + | *[[defocusDeterminationFromThonRing]] | ||
| + | *[[dos2unix]] | ||
| + | *[[electronWaveLength]] | ||
| + | *[[emData2mrc]] | ||
| + | *[[energyTransferModelCheck]] | ||
| + | *[[energyTransferModelResultCheck]] | ||
| + | *[[eosPointRotation]] | ||
| + | *[[fft2d]] | ||
| + | *[[gmolvie]] | ||
| + | *[[hf2000Init]] | ||
| + | *[[hf2000LenzCurrent]] | ||
| + | *[[hf2000SpecimenPosition]] | ||
| + | *[[homology2PG]] | ||
| + | *[[hostCondition]] | ||
| + | *[[imageView]] | ||
| + | *[[imagesClustering]] | ||
| + | *[[imagesView]] | ||
| + | *[[imodst2mrc]] | ||
| + | *[[ip2mrc]] | ||
| + | *[[khorosFilterGenerate]] | ||
| + | *[[largeIPInfo]] | ||
| + | *[[ll2ltlg]] | ||
| + | *[[llDataAverage]] | ||
| + | *[[llDataAxisSearch]] | ||
| + | *[[llDataCTFCompensate]] | ||
| + | *[[llDataCompare]] | ||
| + | *[[llDataContributionCalcDifferentN]] | ||
| + | *[[llDataDump]] | ||
| + | *[[llDataEquatorAdd]] | ||
| + | *[[llDataExtract]] | ||
| + | *[[llDataFit]] | ||
| + | *[[llDataFitServer]] | ||
| + | *[[llDataInfo]] | ||
| + | *[[llDataLowPassFiltering]] | ||
| + | *[[llDataMultiCTFCompensation]] | ||
| + | *[[llDataNEstimation]] | ||
| + | *[[llDataNormalization]] | ||
| + | *[[llDataPrint]] | ||
| + | *[[llDataRescaling]] | ||
| + | *[[llDataResolutionCheck]] | ||
| + | *[[llDataRotation]] | ||
| + | *[[llDataSelectionEstimation]] | ||
| + | *[[llDataSeparate]] | ||
| + | *[[llDataWeightSet]] | ||
| + | *[[llDatarMaxLimit]] | ||
| + | *[[llExtract]] | ||
| + | *[[llExtractCtfinfFileCreate]] | ||
| + | *[[llExtractCtrlFileCreate]] | ||
| + | *[[llExtractWithLayerSeparation]] | ||
| + | *[[llExtractWithLayerSeparationCtrlFileCreate]] | ||
| + | *[[llExtractWithLayerSeparationCtrlFileCreateMyosin]] | ||
| + | *[[llExtractWithLayerSeparationFilamentInfo]] | ||
| + | *[[llExtractWithLayerSeparationServer]] | ||
| + | *[[llExtractWithLayerSeparationSingle]] | ||
| + | *[[ltlg2mrc]] | ||
| + | *[[ltlg2ps]] | ||
| + | *[[ltlgDataInfo]] | ||
| + | *[[mallocCheck]] | ||
| + | *[[marker2Dto3DEstimator]] | ||
| + | *[[matrix3DEulerAngleTransform]] | ||
| + | *[[matrix3DFromEulerAngle]] | ||
| + | *[[matrix3DInverse]] | ||
| + | *[[matrix3DToEulerAngle]] | ||
| + | *[[moi2mrc]] | ||
| + | *[[molecularEnvelopeResampling]] | ||
| + | *[[molecularWeightCalc]] | ||
| + | *[[molvie]] | ||
| + | *[[molvieDock]] | ||
| + | *[[molvieFlight]] | ||
| + | *[[molvieMrcViewer]] | ||
| + | *[[molvieProjection]] | ||
| + | *[[molvieViewer]] | ||
*[[pgDataBaseSelectServer]] | *[[pgDataBaseSelectServer]] | ||
*[[pgJournalSelect]] | *[[pgJournalSelect]] | ||
| Line 460: | Line 487: | ||
*[[pgSelect]] | *[[pgSelect]] | ||
*[[pointAffineTransform]] | *[[pointAffineTransform]] | ||
| + | *[[pointsSetToPDB]] | ||
*[[psFileMerge]] | *[[psFileMerge]] | ||
*[[psFilePageMerge]] | *[[psFilePageMerge]] | ||
Revision as of 23:43, 14 July 2014
Alphabetical Command List
- mrc2Dto3D
- mrc2Dto3DforVariation
- mrc2dsn6
- mrc2fld
- mrc2gif
- mrc2hdf
- mrc2lattice
- mrc2map
- mrc2mrc
- mrc2pov
- mrc2tiff
- mrc2viff
- mrc3DExtractZ
- mrc3Dto2D
- mrcFETnormalizeBySD
- mrcFFTBandPassFilter
- mrcFFTCTFCompensation
- mrcFFTDigitize
- mrcFFTExpression
- mrcFFTFibreDiagram
- mrcFFTFiltering
- mrcFFTIQEstimation
- mrcFFTInfo
- mrcFFTLayerLineCheck
- mrcFFTMedianFilter
- mrcFFTProjection
- mrcFFTResampling
- mrcFFTShellInfo
- mrcFFTSizeChange
- mrcFFTSpectrum
- mrcFFTXFiltering
- mrcFFTplainreduce
- mrcFTMeridianEquatorRedece
- mrcImage1DProjectionfrom2D
- mrcImage1dAverageByCorrelation
- mrcImage1dCutAverage
- mrcImage1dShiftAverageByAnnealing
- mrcImage1dShiftByCorrelation
- mrcImage2DBackProjection
- mrcImage2DProjection
- mrcImage2pdb
- mrcImage3DHighResoEmphasis
- mrcImage3DPad
- mrcImage3DPad2
- mrcImage3DSymmetryFind
- mrcImage3DWindowing
- mrcImageAbnormalValueRemove
- mrcImageActinSingleParticleAnalysis
- mrcImageAdaptiveBinalization
- mrcImageAdd
- mrcImageAddValue
- mrcImageAreaCalc
- mrcImageAsProbability
- mrcImageAssignedToTFofPDB
- mrcImageAutoCorrelationWithWindowing
- mrcImageAutoFilamentExtract
- mrcImageAutoFilamentExtractResultAnalysis
- mrcImageAutoRotationCorrelation
- mrcImageAutoRotationCorrelation3D
- mrcImageAutoRotationCorrelationResultPrint
- mrcImageAverage
- mrcImageBandPassFilter
- mrcImageBilateralFilter
- mrcImageBinalization
- mrcImageBlockMerge
- mrcImageBottomHatTransform
- mrcImageBoundaryInfo
- mrcImageBtest
- mrcImageCCDNoiseRemove
- mrcImageCTFCompensation
- mrcImageCTFCompensationForTiltImage
- mrcImageCTFDetermination
- mrcImageCTFObservation
- mrcImageCTFSN
- mrcImageCVE
- mrcImageCenterDensityChange
- mrcImageCenterGet
- mrcImageCenterOfMassCalculate
- mrcImageCircumferentialProjection
- mrcImageClosing
- mrcImageClusterAnalysis
- mrcImageColoring
- mrcImageCommonLineSearch
- mrcImageConnection
- mrcImageConnectivityNumberCalc
- mrcImageContourSurfaceCreate
- mrcImageConvolution
- mrcImageCoordinateChange
- mrcImageCoreImageCalc
- mrcImageCorrelation
- mrcImageCorrelationInFourierSpace
- mrcImageCorrelationServer
- mrcImageCorrelationWithCTFCompensation
- mrcImageCrystalCreate
- mrcImageCutAndSetInArray
- mrcImageCylinderSection
- mrcImageDeadPixelCorrection
- mrcImageDeconvolution
- mrcImageDensityChangeEstimation
- mrcImageDensityInfo
- mrcImageDensityNormalization
- mrcImageDensityNormalizationByImage
- mrcImageDilation
- mrcImageDisplayDensityAsTempFactor
- mrcImageDistanceConversion
- mrcImageDivideInfoForTomography
- mrcImageDivideIntoTwoImages
- mrcImageDividedByFile
- mrcImageEdgeEnhancement
- mrcImageEdgeImageGet
- mrcImageEnhancementWithFuzzySets
- mrcImageErosion
- mrcImageEstimateTiltImage
- mrcImageExpression
- mrcImageFFT
- mrcImageFFTLayerLineExtraction
- mrcImageFOMCalc
- mrcImageFTest
- mrcImageFeatureExtraction
- mrcImageFilamentSearch
- mrcImageFilterCreate
- mrcImageFilteringbyFile
- mrcImageFilteringbyFileForVariance
- mrcImageFloating
- mrcImageFourierPowerSpectrum
- mrcImageFourierShellCorrelation
- mrcImageFractalFourierShellCorrelation
- mrcImageFractalFrourierShellCorrelation
- mrcImageGaussDisc
- mrcImageGaussSphere
- mrcImageHeaderChange
- mrcImageHelicalAveraging
- mrcImageHelicalConvolution
- mrcImageHelicalMappingFrom2DImage
- mrcImageHelicalMasking
- mrcImageHelicalMaskingBy2DImage
- mrcImageHelicalProjection
- mrcImageHighPassFilter
- mrcImageHighlighting
- mrcImageInfo
- mrcImageInverseRadonTransform
- mrcImageLabeling
- mrcImageLogicalOperation
- mrcImageLowPassFilter
- mrcImageMagnificationChange
- mrcImageMake2DArrayImage
- mrcImageMakeCylinder
- mrcImageMakeDump
- mrcImageMakeFromTextFile
- mrcImageMakeSphere
- mrcImageMappingtoPdb
- mrcImageMasking
- mrcImageMaskingByImage
- mrcImageMergebyside
- mrcImageMirroring
- mrcImageModeChange
- mrcImageModelCreate
- mrcImageModelSubfilamentsCreate
- mrcImageMontageCreate
- mrcImageMove
- mrcImageMultiCTFCompensation
- mrcImageMultiCTFDetermination
- mrcImageMultiplying
- mrcImageMultiplyingbyFile
- mrcImageNLMeansFilter
- mrcImageNeuralNetParticleExtraction
- mrcImageNeuralNetParticleLearning
- mrcImageNfoldAxisSearch
- mrcImageNoiseAdd
- mrcImageNoiseCreate
- mrcImageNoiseReductionByRelaxation
- mrcImageNormalDistributionTest
- mrcImageNormalizedSubtraction
- mrcImageNormalizing
- mrcImageNullImageCreate
- mrcImageOddBoxel
- mrcImageOneLineSimilarityCalc
- mrcImageOpening
- mrcImageOrientationSearch
- mrcImageOrientationSearchByHigherSelection
- mrcImageOrientationSearchByHybridization
- mrcImageOrientationSearchBySimultaneousMinimization
- mrcImagePCA
- mrcImagePad
- mrcImagePanoramaCreate
- mrcImageParticleCandidateExtract
- mrcImagePeakSearch
- mrcImagePhaseCTFCompensationFromCTFINFO
- mrcImagePixelDataGet
- mrcImagePolyROI
- mrcImagePosterization
- mrcImagePrint
- mrcImagePrint3D
- mrcImageProjection
- mrcImagePut3D
- mrcImageROI
- mrcImageROI3D
- mrcImageROIs
- mrcImageROItoPCAoutputImage
- mrcImageRadialDistribution
- mrcImageRadonTransform
- mrcImageRandomParticlesImageCreate
- mrcImageRealValueAdd
- mrcImageRectangleGet
- mrcImageRectangleGetByCorrelation
- mrcImageRefConv2D
- mrcImageRefCreate
- mrcImageRefFFTConv2D
- mrcImageRefScaleChangeWithPad
- mrcImageResolutionEstimateForFilaments
- mrcImageReverse
- mrcImageRotation
- mrcImageRotation3D
- mrcImageSN
- mrcImageSamplingUnitChange
- mrcImageScalarAdd
- mrcImageSectionGet
- mrcImageSetFunction
- mrcImageShapeOrientation
- mrcImageShapePCA
- mrcImageShapePCAFit
- mrcImageShift
- mrcImageShiftFollowingGC
- mrcImageShrink
- mrcImageSiemensStar
- mrcImageSimilarImageSearch
- mrcImageSimilarityEstimate
- mrcImageSinogramCorrelation
- mrcImageSinogramCreate
- mrcImageSinogramFFT
- mrcImageSmoothing
- mrcImageSolventFlattening
- mrcImageSphere
- mrcImageSphereCheck
- mrcImageSplit
- mrcImageSquare
- mrcImageStack
- mrcImageStandardDeviation
- mrcImageSubtraction
- mrcImageSuperResolution
- mrcImageSymmetryAverage
- mrcImageSymmetryCentreFind
- mrcImageSymmetryFind
- mrcImageTTest
- mrcImageTfunction
- mrcImageTiltAxisSearch
- mrcImageTiltAxisSearchHelp
- mrcImageToNAMDConstantForces
- mrcImageToPointsSet
- mrcImageTopHatTransform
- mrcImageTrans
- mrcImageTransformDescartesIntoPolar
- mrcImageTransformSign
- mrcImageTranspose
- mrcImageTwoImageTest
- mrcImageUnbentROI
- mrcImageUnexpectedMassFromPDB
- mrcImageUntwist
- mrcImageVarianceAnalysis
- mrcImageVarianceMap
- mrcImageVolumeCalc
- mrcImageWindowing
- mrcImageZPad
- mrcImagepdbFileReduce
- mrcImagesSinogramCorrelation
- mrcImagestoRef
- mrcImateToPointsSet
- mrcInfo
- mrcInfoSet
- mrcManipulate_kaya
- mrcMask
- mrcMeanYlinePos
- mrcMirrorImageCreate
- mrcRadon2Dto3D
- mrcRefCorEstimate
- mrcRefCorModify
- mrcRefCoreGet
- mrcRefCorrelation
- mrcRefCorrelationConv
- mrcRefEstimate
- mrcRefFFTConvert
- mrcRefHeaderCreate
- mrcRefHighPassFilter
- mrcRefImageCorrelation
- mrcRefImageOmegaCorrelation
- mrcRefImagepwzCorEstimate
- mrcRefImagepwzCorModify
- mrcRefImagepwzCorPeakFind
- mrcRefImagepwzCorSmoothing
- mrcRefImagepwzCorrelation
- mrcRefImagepwzCorrelationByFFT
- mrcRefImagexaFit
- mrcRefLowPassFilter
- mrcRefNoiseAdd
- mrcRefNormalizing
- mrcRefPhaseImageCreate
- mrcRefSmoothing
- mrcRefz1ImageCorrelation
- mrcSinogramFET
- mrcSinogramFETcalcSDforNormalize
- mrcSinogramFETcalcWeight
- mrcSinogramFETcorrelationMap
- mrcSinogramFETnormalizedMap
- mrcSinogramFETreferredCorrelation
- mrcSinogramFETsmoothParameterMatching
- mrcView
- muscleSimulation
- obj3Don2DImageView
- openGLTest
- pdb2SketchMacro
- pdb2bender
- pdb2mrc
- pdb2mrc2d
- pdb2mrc2dWithCTF
- pdb2ucd
- pdbAtomSection
- pdbCAOnly
- pdbChargeFit
- pdbCoordAdd
- pdbCrystalCreate
- pdbDisplay
- pdbFileMerge
- pdbHelix
- pdbHomologySearch
- pdbInfo
- pdbListRMSDCalc
- pdbListVectorCalc
- pdbMatrixCreate
- pdbMolecularInterfaceFind
- pdbMove
- pdbNAMDRestraintCreate
- pdbNearAtomListShow
- pdbOneProteinGet
- pdbPCA
- pdbProteinIDSet
- pdbRhoFit
- pdbRhoFitCoiledCoil
- pdbRhoFitTm
- pdbRotation
- pdbSecondaryStructurePrint
- pdbShapeFit
- pdbSurface
- pdbTempFactorSet
- pdbTrans
- pdbTwoProteinFit
- pdbView
- pdbWaterAdd
- CheckCommonLineData
- CheckOfOrientation
- CheckOrientationByDegree
- CommonLineCalculation
- CommonLineRankCalc_k
- Descartes2Polar
- Display2
- Display3
- Eos
- EvaluateCorrelationMapwithCommonLine
- FETOrientationSearchByAnnealing
- FETOrientationSearchByFeatureAlignment
- FETmapOrientationSearchBySimultaneousFitting
- FETsmallMapSetCreate_forSimultaneousMinimization
- LCalculationForOrientationSearch
- Polar2Descartes
- ProjectionDirectionMapCreate
- StereoDisplay
- TestForLcalculationOfOrientationSearchBySimultaneousMinimization
- Visualmake
- WeightCalculationOfCommonLineSearch
- WeightCalculationOfCommonLineSearchByAllSinogram
- WeigthCaluculationOfCommonLineCalculation
- angleMatchTest_k
- anglediffcalc
- anglediffchk
- array2mrc
- bin2mrc
- bmp2mrc
- bmpFileInfo
- calcCommonLine
- clusterLog2ToLog
- clusterLogASCII2Binary
- clusterShow
- commonLinesSearchByVoting
- coordRotation
- ctfDeterminationFromMultiImage
- ctfDeterminationFromPhaseComparison
- ctfDeterminationFromThonRing
- ctfDetermine
- ctfDisplay
- ctfEnvelopFunction
- ctfFunction
- ctfFunctionServer
- ctfInfoSet
- ctfMultiFunction
- ctfWeightMapCreation
- ctfZeroPoint
- cufft
- dataAnalysis_kayabuki
- dcdAtomChangeDistanceFromAtom
- dcdAtomDistanceDistribution
- dcdCompareCA
- dcdDistanceAtomBetweenAtom
- dcdFilePrint
- dcdInfo
- dcdSelectAtoms
- dcdSerectAtom
- dcdTest
- dcdTimeSeriesBehavior
- defocusDeterminationFromThonRing
- dos2unix
- electronWaveLength
- emData2mrc
- energyTransferModelCheck
- energyTransferModelResultCheck
- eosPointRotation
- fft2d
- gmolvie
- hf2000Init
- hf2000LenzCurrent
- hf2000SpecimenPosition
- homology2PG
- hostCondition
- imageView
- imagesClustering
- imagesView
- imodst2mrc
- ip2mrc
- khorosFilterGenerate
- largeIPInfo
- ll2ltlg
- llDataAverage
- llDataAxisSearch
- llDataCTFCompensate
- llDataCompare
- llDataContributionCalcDifferentN
- llDataDump
- llDataEquatorAdd
- llDataExtract
- llDataFit
- llDataFitServer
- llDataInfo
- llDataLowPassFiltering
- llDataMultiCTFCompensation
- llDataNEstimation
- llDataNormalization
- llDataPrint
- llDataRescaling
- llDataResolutionCheck
- llDataRotation
- llDataSelectionEstimation
- llDataSeparate
- llDataWeightSet
- llDatarMaxLimit
- llExtract
- llExtractCtfinfFileCreate
- llExtractCtrlFileCreate
- llExtractWithLayerSeparation
- llExtractWithLayerSeparationCtrlFileCreate
- llExtractWithLayerSeparationCtrlFileCreateMyosin
- llExtractWithLayerSeparationFilamentInfo
- llExtractWithLayerSeparationServer
- llExtractWithLayerSeparationSingle
- ltlg2mrc
- ltlg2ps
- ltlgDataInfo
- mallocCheck
- marker2Dto3DEstimator
- matrix3DEulerAngleTransform
- matrix3DFromEulerAngle
- matrix3DInverse
- matrix3DToEulerAngle
- moi2mrc
- molecularEnvelopeResampling
- molecularWeightCalc
- molvie
- molvieDock
- molvieFlight
- molvieMrcViewer
- molvieProjection
- molvieViewer
- pgDataBaseSelectServer
- pgJournalSelect
- pgJournalSelectCORBAClient
- pgJournalSelectCORBAServer
- pgMemoSelectCORBAServer
- pgSelect
- pointAffineTransform
- pointsSetToPDB
- psFileMerge
- psFilePageMerge
- randomNormalGet
- randomUniformGet
- rasmonyo
- smolet
- tgaInfo
- tiff2mrc
- tiltInfoDetermine
- vector2pdb
- vectorImageNearestNeighborMethod
